STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO90159.1TetR family transcriptional regulator. (202 aa)    
Predicted Functional Partners:
CDO90156.1
Luciferase family protein.
 
     0.650
CDO90152.1
Hypothetical protein.
 
     0.580
CDO90158.1
Hypothetical protein.
 
     0.579
CDO90256.1
Putative 6-phosphofructokinase.
  
     0.573
CDO90254.1
Putative 6-phosphofructokinase.
  
     0.569
CDO90154.1
Pyruvate, water dikinase.
 
     0.548
CDO90321.1
Luciferase family protein.
  
     0.543
CDO90255.1
Luciferase family protein.
  
     0.500
CDO91199.1
Hypothetical protein.
  
     0.495
CDO90153.1
Hypothetical protein.
       0.477
Your Current Organism:
Mycobacterium triplex
NCBI taxonomy Id: 47839
Other names: ATCC 700071, CIP 106108, DSM 44626, JCM 14744, M. triplex
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.