Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDO87725.1 | CDO90345.1 | BN973_02081 | BN973_04738 | NADP-dependent alcohol dehydrogenase c. | Fatty aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.898 |
CDO87725.1 | CDO90751.1 | BN973_02081 | BN973_05151 | NADP-dependent alcohol dehydrogenase c. | acyl-CoA dehydrogenase. | 0.504 |
CDO87725.1 | pta | BN973_02081 | BN973_01064 | NADP-dependent alcohol dehydrogenase c. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.505 |
CDO87887.1 | CDO90345.1 | BN973_02245 | BN973_04738 | Lactate 2-monooxygenase. | Fatty aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.884 |
CDO87887.1 | ackA | BN973_02245 | BN973_01065 | Lactate 2-monooxygenase. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.885 |
CDO87887.1 | acs | BN973_02245 | BN973_00011 | Lactate 2-monooxygenase. | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.890 |
CDO87887.1 | gabT | BN973_02245 | BN973_02535 | Lactate 2-monooxygenase. | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.483 |
CDO87887.1 | pta | BN973_02245 | BN973_01064 | Lactate 2-monooxygenase. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.568 |
CDO90345.1 | CDO87725.1 | BN973_04738 | BN973_02081 | Fatty aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | NADP-dependent alcohol dehydrogenase c. | 0.898 |
CDO90345.1 | CDO87887.1 | BN973_04738 | BN973_02245 | Fatty aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Lactate 2-monooxygenase. | 0.884 |
CDO90345.1 | CDO90751.1 | BN973_04738 | BN973_05151 | Fatty aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | acyl-CoA dehydrogenase. | 0.898 |
CDO90345.1 | CDO91053.1 | BN973_04738 | BN973_05459 | Fatty aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds. | 0.884 |
CDO90345.1 | ackA | BN973_04738 | BN973_01065 | Fatty aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.888 |
CDO90345.1 | acs | BN973_04738 | BN973_00011 | Fatty aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.904 |
CDO90345.1 | gabT | BN973_04738 | BN973_02535 | Fatty aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.916 |
CDO90345.1 | gadB | BN973_04738 | BN973_01477 | Fatty aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | GadB; Belongs to the group II decarboxylase family. | 0.893 |
CDO90345.1 | panD | BN973_04738 | BN973_05534 | Fatty aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Aspartate alpha-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.882 |
CDO90345.1 | pta | BN973_04738 | BN973_01064 | Fatty aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.888 |
CDO90751.1 | CDO87725.1 | BN973_05151 | BN973_02081 | acyl-CoA dehydrogenase. | NADP-dependent alcohol dehydrogenase c. | 0.504 |
CDO90751.1 | CDO90345.1 | BN973_05151 | BN973_04738 | acyl-CoA dehydrogenase. | Fatty aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.898 |
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