STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO90381.1Putative acyl-CoA dehydrogenase. (387 aa)    
Predicted Functional Partners:
CDO90751.1
acyl-CoA dehydrogenase.
  
 0.887
echA21
enoyl-CoA hydratase.
   
 0.815
CDO90622.1
enoyl-CoA hydratase.
   
 0.815
CDO86990.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.814
echA9
3-hydroxyisobutyryl-CoA hydrolase.
   
 0.814
echA20
enoyl-CoA hydratase.
   
 0.812
CDO91069.1
enoyl-CoA hydratase.
   
 0.812
fixB
Electron transfer flavoprotein subunit alpha.
 0.810
CDO90700.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.803
CDO86988.1
enoyl-CoA hydratase.
   
  0.802
Your Current Organism:
Mycobacterium triplex
NCBI taxonomy Id: 47839
Other names: ATCC 700071, CIP 106108, DSM 44626, JCM 14744, M. triplex
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