STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pks16Polyketide synthase. (545 aa)    
Predicted Functional Partners:
CDO88385.1
Linear gramicidin synthetase subunit B.
0.933
ppsD
Phenolpthiocerol synthesis type-I polyketide synthase PpsD.
 0.924
CDO87459.1
Linear gramicidin synthetase subunit B.
0.919
CDO89681.1
Beta-ketoacyl synthase.
 0.903
mas_2
Multifunctional mycocerosic acid synthase membrane-associated MAS.
 0.902
ppsC
Phenolpthiocerol synthesis type-I polyketide synthase PpsC.
 0.900
CDO89146.1
Erythronolide synthase, modules 3 and 4.
 0.860
CDO88516.1
Erythronolide synthase, modules 3 and 4.
 0.851
CDO88515.1
RifB protein.
 0.845
CDO89623.1
MbtD protein.
 
 0.824
Your Current Organism:
Mycobacterium triplex
NCBI taxonomy Id: 47839
Other names: ATCC 700071, CIP 106108, DSM 44626, JCM 14744, M. triplex
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.