STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO90827.1Rieske (2Fe-2S) domain-containing protein. (425 aa)    
Predicted Functional Partners:
CDO90830.1
Hypothetical protein.
 
     0.931
CDO88130.1
3-phenylpropionate dioxygenase subunit beta.
 
 0.929
CDO90367.1
Beta subunit of hydroxylase component of benzoate 1,2-dioxygenase.
 
 0.918
CDO91493.1
Dioxygenase small subunit.
 
 0.902
CDO90831.1
acyl-CoA dehydrogenase.
 
     0.891
CDO90829.1
Amidohydrolase.
 
     0.878
CDO90832.1
Putative acyl-CoA dehydrogenase.
 
     0.876
CDO90828.1
Hypothetical protein.
       0.850
CDO90826.1
Carboxymuconolactone decarboxylase.
 
     0.841
CDO89116.1
SnoaL-like polyketide cyclase.
  
 0.798
Your Current Organism:
Mycobacterium triplex
NCBI taxonomy Id: 47839
Other names: ATCC 700071, CIP 106108, DSM 44626, JCM 14744, M. triplex
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.