pstC protein (Mycobacterium triplex) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

pstC

Phosphate ABC transporter permease. (646 aa)

Predicted Functional Partners:

phoT

0.999

CDO90903.1

0.996

pstS

0.956

phoS2_2

0.922

CDO90661.1

0.922

phoS2_3

0.922

phoS2_1

0.921

phoS2_4

0.919

pstS1

0.913

CDO87444.1

0.912

Your Current Organism:

Mycobacterium triplex

NCBI taxonomy Id: 47839
Other names: ATCC 700071, CIP 106108, DSM 44626, JCM 14744, M. triplex

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDO87444.1	CDO90661.1	BN973_01797	BN973_05059	Periplasmic phosphate-binding lipoprotein pstS1; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.	Phosphate ABC transporter substrate-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.	0.874
CDO87444.1	CDO90903.1	BN973_01797	BN973_05308	Periplasmic phosphate-binding lipoprotein pstS1; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.	phoS2_1; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.	0.875
CDO87444.1	phoS2_1	BN973_01797	BN973_03232	Periplasmic phosphate-binding lipoprotein pstS1; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.	Periplasmic phosphate-binding lipoprotein PhoS2; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.	0.542
CDO87444.1	phoS2_2	BN973_01797	BN973_05058	Periplasmic phosphate-binding lipoprotein pstS1; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.	Periplasmic phosphate-binding lipoprotein PhoS2; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.	0.874
CDO87444.1	phoS2_3	BN973_01797	BN973_06040	Periplasmic phosphate-binding lipoprotein pstS1; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.	Periplasmic phosphate-binding lipoprotein PhoS2; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.	0.838
CDO87444.1	phoS2_4	BN973_01797	BN973_06042	Periplasmic phosphate-binding lipoprotein pstS1; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.	Periplasmic phosphate-binding lipoprotein PhoS2; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.	0.520
CDO87444.1	phoT	BN973_01797	BN973_05306	Periplasmic phosphate-binding lipoprotein pstS1; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.	Phosphate transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.	0.943
CDO87444.1	pstC	BN973_01797	BN973_05307	Periplasmic phosphate-binding lipoprotein pstS1; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.	Phosphate ABC transporter permease.	0.912
CDO87444.1	pstS	BN973_01797	BN973_01382	Periplasmic phosphate-binding lipoprotein pstS1; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.	Phosphate ABC transporter phosphate-binding protein PstS; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.	0.551
CDO90661.1	CDO87444.1	BN973_05059	BN973_01797	Phosphate ABC transporter substrate-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.	Periplasmic phosphate-binding lipoprotein pstS1; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.	0.874
CDO90661.1	CDO90903.1	BN973_05059	BN973_05308	Phosphate ABC transporter substrate-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.	phoS2_1; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.	0.408
CDO90661.1	phoS2_2	BN973_05059	BN973_05058	Phosphate ABC transporter substrate-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.	Periplasmic phosphate-binding lipoprotein PhoS2; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.	0.943
CDO90661.1	phoS2_4	BN973_05059	BN973_06042	Phosphate ABC transporter substrate-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.	Periplasmic phosphate-binding lipoprotein PhoS2; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.	0.757
CDO90661.1	phoT	BN973_05059	BN973_05306	Phosphate ABC transporter substrate-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.	Phosphate transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.	0.955
CDO90661.1	pstC	BN973_05059	BN973_05307	Phosphate ABC transporter substrate-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.	Phosphate ABC transporter permease.	0.922
CDO90661.1	pstS1	BN973_05059	BN973_01970	Phosphate ABC transporter substrate-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.	Phosphate ABC transporter substrate-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.	0.874
CDO90903.1	CDO87444.1	BN973_05308	BN973_01797	phoS2_1; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.	Periplasmic phosphate-binding lipoprotein pstS1; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.	0.875
CDO90903.1	CDO90661.1	BN973_05308	BN973_05059	phoS2_1; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.	Phosphate ABC transporter substrate-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.	0.408
CDO90903.1	phoS2_1	BN973_05308	BN973_03232	phoS2_1; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.	Periplasmic phosphate-binding lipoprotein PhoS2; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.	0.412
CDO90903.1	phoS2_2	BN973_05308	BN973_05058	phoS2_1; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.	Periplasmic phosphate-binding lipoprotein PhoS2; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.	0.408