STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO91027.1Hypothetical protein. (237 aa)    
Predicted Functional Partners:
CDO91026.1
acyl-CoA synthetase.
       0.800
CDO91025.1
acyl-CoA dehydrogenase.
       0.786
CDO91024.1
fadE26_1.
       0.731
CDO90997.1
Trypsin domain-containing protein.
  
  
 0.659
CDO86465.1
Hypothetical protein.
  
     0.552
CDO90448.1
Acyltransferase, WS/DGAT/MGAT.
  
     0.541
CDO86417.1
TetR family transcriptional regulator.
  
     0.540
CDO87985.1
Hypothetical protein.
 
     0.486
fdxD
Ferredoxin FDXD.
       0.471
CDO90068.1
TPR repeat-containing protein.
  
     0.464
Your Current Organism:
Mycobacterium triplex
NCBI taxonomy Id: 47839
Other names: ATCC 700071, CIP 106108, DSM 44626, JCM 14744, M. triplex
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.