STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO91152.1Hypothetical protein. (235 aa)    
Predicted Functional Partners:
ppa
Inorganic pyrophosphatase Ppa; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
       0.643
CDO91149.1
Putative hydrolase/uncharacterized protein, coenzyme F420 biosynthesis associated.
 
     0.551
CDO90448.1
Acyltransferase, WS/DGAT/MGAT.
  
     0.494
tilS
tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.
       0.481
CDO86297.1
Oxidoreductase, zinc-binding dehydrogenase family protein.
  
     0.468
CDO91150.1
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase.
       0.463
hpt
Hypoxanthine-guanine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
       0.453
CDO86891.1
Putative integral membrane protein.
  
     0.435
CDO86894.1
Transmembrane protein.
  
     0.433
CDO87832.1
Multidrug ABC transporter inner membrane protein.
  
     0.422
Your Current Organism:
Mycobacterium triplex
NCBI taxonomy Id: 47839
Other names: ATCC 700071, CIP 106108, DSM 44626, JCM 14744, M. triplex
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