STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO91540.1Putative 6-phosphofructokinase. (338 aa)    
Predicted Functional Partners:
CDO91539.1
PEP-utilizing protein.
       0.784
CDO85701.1
Hypothetical protein.
  
     0.736
CDO91495.1
Putative nucleic-acid-binding protein containing a Zn-ribbon.
  
     0.684
CDO87184.1
Putative nucleic-acid-binding protein containing a Zn-ribbon.
  
     0.642
CDO91543.1
acyl-CoA dehydrogenase.
 
  0.636
CDO90323.1
Hypothetical protein.
  
     0.626
CDO91508.1
Amidohydrolase 2.
  
     0.610
CDO91541.1
Hypothetical protein.
       0.608
CDO91493.1
Dioxygenase small subunit.
  
     0.603
CDO91530.1
Transcriptional regulator.
  
     0.578
Your Current Organism:
Mycobacterium triplex
NCBI taxonomy Id: 47839
Other names: ATCC 700071, CIP 106108, DSM 44626, JCM 14744, M. triplex
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.