STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIR65334.1Magnesium chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (484 aa)    
Predicted Functional Partners:
KIR65335.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.993
HemG
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
   
 
 0.960
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
 
 
 0.931
KIR66744.1
Inter-alpha-trypsin inhibitor heavy chain H5; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.803
KIR66950.1
Von Willebrand factor A; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.803
KIR66311.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.803
KIR67009.1
VWA containing CoxE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.803
KIR63304.1
Von Willebrand factor A; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.803
KIR60937.1
Von Willebrand factor A; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.803
cobN
Cobalamin biosynthesis protein CobN; With CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.773
Your Current Organism:
Micromonospora carbonacea
NCBI taxonomy Id: 47853
Other names: ATCC 27114, ATCC 27115, DSM 43168, DSM 43815, IFO 14107, IFO 14108, JCM 3139, M. carbonacea, Micromonospora carbonacea subsp. aurantiaca, Micromonospora carbonacea subsp. carbonacea, NBRC 14108, NRRL 2972
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