STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIR65926.1Acylneuraminate cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa)    
Predicted Functional Partners:
PseI
N-acetylneuraminate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.992
KIR66894.1
Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.985
PseB
UDP-4-dehydro-6-deoxy-2-acetamido-D-glucose 4-reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.950
KIR65929.1
Aminotransferase DegT; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.936
KIR66364.1
Beta-alanine-pyruvate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
      0.903
KIR66895.1
GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.845
KIR65928.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.806
KIR66100.1
Aminotransferase class III; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
      0.803
KIR65927.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.779
hemL
Glutamate-1-semialdehyde aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.583
Your Current Organism:
Micromonospora carbonacea
NCBI taxonomy Id: 47853
Other names: ATCC 27114, ATCC 27115, DSM 43168, DSM 43815, IFO 14107, IFO 14108, JCM 3139, M. carbonacea, Micromonospora carbonacea subsp. aurantiaca, Micromonospora carbonacea subsp. carbonacea, NBRC 14108, NRRL 2972
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