Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KIR63426.1Ricin B lectin; Derived by automated computational analysis using gene prediction method: Protein Homology. (973 aa)    
Predicted Functional Partners:
KIR62625.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.563
KIR65488.1
Cellulose-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.514
KIR65729.1
Cellulose-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.508
KIR66440.1
Sulfotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.493
KIR66881.1
Cellulose-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.487
KIR60837.1
Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 18 family.
  
   
 0.485
KIR66025.1
Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.448
rpsH
30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.
   
   0.446
KIR65766.1
Endoglucanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.445
KIR62626.1
Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.430
Your Current Organism:
Micromonospora carbonacea
NCBI taxonomy Id: 47853
Other names: ATCC 27114, ATCC 27115, DSM 43168, DSM 43815, IFO 14107, IFO 14108, JCM 3139, M. carbonacea, Micromonospora carbonacea subsp. aurantiaca, Micromonospora carbonacea subsp. carbonacea, NBRC 14108, NRRL 2972
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