STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL45968.1Glycosyl hydrolase family 26; Belongs to the glycosyl hydrolase 26 family. (386 aa)    
Predicted Functional Partners:
SCL45954.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
  
  0.745
SCL57588.1
Endoglucanase.
    
 0.663
SCL51950.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
    
 0.655
SCL56707.1
Mannan endo-1,4-beta-mannosidase.
  
  
  0.621
SCL45957.1
Glycosyl hydrolase family 26; Belongs to the glycosyl hydrolase 26 family.
 
    
0.604
SCL45963.1
Glycosyl hydrolase family 26; Belongs to the glycosyl hydrolase 26 family.
 
    
0.603
SCL45935.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
    
 0.582
SCL49277.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
    
  0.457
SCL70057.1
Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains.
    
  0.457
SCL45949.1
Mannosyltransferase.
       0.456
Your Current Organism:
Micromonospora chersina
NCBI taxonomy Id: 47854
Other names: ATCC 53710, DSM 44151, IFO 15963, JCM 9459, M. chersina, NBRC 15963, strain M956-1
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