Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCL46631.1 | SCL46635.1 | GA0070603_0209 | GA0070603_0210 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | acyl-CoA thioesterase. | 0.992 |
SCL46631.1 | SCL55621.1 | GA0070603_0209 | GA0070603_2039 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Amino acid adenylation domain-containing protein. | 0.902 |
SCL46631.1 | SCL55626.1 | GA0070603_0209 | GA0070603_2040 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Amino acid adenylation domain-containing protein. | 0.846 |
SCL46631.1 | SCL55815.1 | GA0070603_0209 | GA0070603_2078 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Amino acid adenylation domain-containing protein. | 0.902 |
SCL46631.1 | SCL55820.1 | GA0070603_0209 | GA0070603_2079 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Amino acid adenylation domain-containing protein. | 0.846 |
SCL46631.1 | SCL63632.1 | GA0070603_0209 | GA0070603_3633 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.937 |
SCL46631.1 | SCL63636.1 | GA0070603_0209 | GA0070603_3634 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD. | 0.954 |
SCL46631.1 | SCL63642.1 | GA0070603_0209 | GA0070603_3635 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC. | 0.955 |
SCL46631.1 | SCL63650.1 | GA0070603_0209 | GA0070603_3636 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB. | 0.962 |
SCL46631.1 | SCL63657.1 | GA0070603_0209 | GA0070603_3637 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA. | 0.955 |
SCL46635.1 | SCL46631.1 | GA0070603_0210 | GA0070603_0209 | acyl-CoA thioesterase. | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 0.992 |
SCL46635.1 | SCL55621.1 | GA0070603_0210 | GA0070603_2039 | acyl-CoA thioesterase. | Amino acid adenylation domain-containing protein. | 0.604 |
SCL46635.1 | SCL55626.1 | GA0070603_0210 | GA0070603_2040 | acyl-CoA thioesterase. | Amino acid adenylation domain-containing protein. | 0.857 |
SCL46635.1 | SCL55815.1 | GA0070603_0210 | GA0070603_2078 | acyl-CoA thioesterase. | Amino acid adenylation domain-containing protein. | 0.604 |
SCL46635.1 | SCL55820.1 | GA0070603_0210 | GA0070603_2079 | acyl-CoA thioesterase. | Amino acid adenylation domain-containing protein. | 0.857 |
SCL46635.1 | SCL63632.1 | GA0070603_0210 | GA0070603_3633 | acyl-CoA thioesterase. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.974 |
SCL46635.1 | SCL63636.1 | GA0070603_0210 | GA0070603_3634 | acyl-CoA thioesterase. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD. | 0.977 |
SCL46635.1 | SCL63642.1 | GA0070603_0210 | GA0070603_3635 | acyl-CoA thioesterase. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC. | 0.977 |
SCL46635.1 | SCL63650.1 | GA0070603_0210 | GA0070603_3636 | acyl-CoA thioesterase. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB. | 0.979 |
SCL46635.1 | SCL63657.1 | GA0070603_0210 | GA0070603_3637 | acyl-CoA thioesterase. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA. | 0.977 |
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