Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCL47736.1 | SCL47740.1 | GA0070603_0440 | GA0070603_0441 | D-lactate dehydrogenase. | Mycoredoxin. | 0.683 |
SCL47736.1 | SCL47746.1 | GA0070603_0440 | GA0070603_0442 | D-lactate dehydrogenase. | Nitroalkane oxidase. | 0.618 |
SCL47740.1 | SCL47736.1 | GA0070603_0441 | GA0070603_0440 | Mycoredoxin. | D-lactate dehydrogenase. | 0.683 |
SCL47740.1 | SCL47746.1 | GA0070603_0441 | GA0070603_0442 | Mycoredoxin. | Nitroalkane oxidase. | 0.752 |
SCL47740.1 | SCL52363.1 | GA0070603_0441 | GA0070603_1386 | Mycoredoxin. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.722 |
SCL47740.1 | SCL57537.1 | GA0070603_0441 | GA0070603_2439 | Mycoredoxin. | Ribonucleoside-diphosphate reductase class II; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | 0.987 |
SCL47740.1 | SCL66637.1 | GA0070603_0441 | GA0070603_4255 | Mycoredoxin. | Helix-turn-helix domain-containing protein. | 0.680 |
SCL47740.1 | SCL70937.1 | GA0070603_0441 | GA0070603_5732 | Mycoredoxin. | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | 0.670 |
SCL47740.1 | msrA | GA0070603_0441 | GA0070603_0907 | Mycoredoxin. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.756 |
SCL47740.1 | msrA-2 | GA0070603_0441 | GA0070603_3095 | Mycoredoxin. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.756 |
SCL47740.1 | msrA-3 | GA0070603_0441 | GA0070603_5552 | Mycoredoxin. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.756 |
SCL47740.1 | ribBA | GA0070603_0441 | GA0070603_1678 | Mycoredoxin. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.676 |
SCL47746.1 | SCL47736.1 | GA0070603_0442 | GA0070603_0440 | Nitroalkane oxidase. | D-lactate dehydrogenase. | 0.618 |
SCL47746.1 | SCL47740.1 | GA0070603_0442 | GA0070603_0441 | Nitroalkane oxidase. | Mycoredoxin. | 0.752 |
SCL52363.1 | SCL47740.1 | GA0070603_1386 | GA0070603_0441 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Mycoredoxin. | 0.722 |
SCL52363.1 | SCL57537.1 | GA0070603_1386 | GA0070603_2439 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Ribonucleoside-diphosphate reductase class II; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | 0.603 |
SCL52363.1 | msrA | GA0070603_1386 | GA0070603_0907 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.432 |
SCL52363.1 | msrA-2 | GA0070603_1386 | GA0070603_3095 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.432 |
SCL52363.1 | msrA-3 | GA0070603_1386 | GA0070603_5552 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.432 |
SCL57537.1 | SCL47740.1 | GA0070603_2439 | GA0070603_0441 | Ribonucleoside-diphosphate reductase class II; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | Mycoredoxin. | 0.987 |
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