STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL48700.1Anti-sigma regulatory factor (Ser/Thr protein kinase). (311 aa)    
Predicted Functional Partners:
SCL48705.1
MEDS: MEthanogen/methylotroph, DcmR Sensory domain; Manually curated.
 
     0.847
SCL48696.1
tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA.
       0.773
SCL55474.1
STAS domain-containing protein.
 
   0.691
SCL52895.1
Anti-anti-sigma factor.
  
   0.669
SCL45978.1
Cutinase.
  
     0.643
SCL64006.1
rsbT co-antagonist protein RsbR.
  
   0.636
SCL64000.1
rsbT antagonist protein RsbS.
  
   0.635
SCL58113.1
Signal transduction histidine kinase.
  
 
 0.631
SCL55645.1
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
  
   0.618
SCL68238.1
Diguanylate cyclase/phosphodiesterase.
  
   0.613
Your Current Organism:
Micromonospora chersina
NCBI taxonomy Id: 47854
Other names: ATCC 53710, DSM 44151, IFO 15963, JCM 9459, M. chersina, NBRC 15963, strain M956-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.