Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCL49536.1 | SCL49541.1 | GA0070603_0799 | GA0070603_0800 | Hypothetical protein. | PucR C-terminal helix-turn-helix domain-containing protein. | 0.570 |
SCL49536.1 | SCL49546.1 | GA0070603_0799 | GA0070603_0801 | Hypothetical protein. | Uncharacterized membrane protein YccF, DUF307 family. | 0.449 |
SCL49541.1 | SCL49536.1 | GA0070603_0800 | GA0070603_0799 | PucR C-terminal helix-turn-helix domain-containing protein. | Hypothetical protein. | 0.570 |
SCL49541.1 | SCL49546.1 | GA0070603_0800 | GA0070603_0801 | PucR C-terminal helix-turn-helix domain-containing protein. | Uncharacterized membrane protein YccF, DUF307 family. | 0.628 |
SCL49546.1 | SCL49536.1 | GA0070603_0801 | GA0070603_0799 | Uncharacterized membrane protein YccF, DUF307 family. | Hypothetical protein. | 0.449 |
SCL49546.1 | SCL49541.1 | GA0070603_0801 | GA0070603_0800 | Uncharacterized membrane protein YccF, DUF307 family. | PucR C-terminal helix-turn-helix domain-containing protein. | 0.628 |
SCL49546.1 | SCL71645.1 | GA0070603_0801 | GA0070603_6013 | Uncharacterized membrane protein YccF, DUF307 family. | Membrane protein implicated in regulation of membrane protease activity. | 0.739 |
SCL71645.1 | SCL49546.1 | GA0070603_6013 | GA0070603_0801 | Membrane protein implicated in regulation of membrane protease activity. | Uncharacterized membrane protein YccF, DUF307 family. | 0.739 |