STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL52357.1Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein. (152 aa)    
Predicted Functional Partners:
SCL62764.1
DNA-binding transcriptional regulator, Lrp family.
  
     0.773
SCL46945.1
Transcriptional regulator, AsnC family.
  
     0.767
SCL69735.1
uroporphyrinogen-III C-methyltransferase.
  
 
 0.628
SCL62254.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.608
SCL52347.1
tRNA(Arg) A34 adenosine deaminase TadA.
       0.586
SCL52353.1
Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase).
       0.553
SCL71800.1
Phenazine biosynthesis protein phzE.
   
 
  0.538
SCL64851.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
    
  0.535
Your Current Organism:
Micromonospora chersina
NCBI taxonomy Id: 47854
Other names: ATCC 53710, DSM 44151, IFO 15963, JCM 9459, M. chersina, NBRC 15963, strain M956-1
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