STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL52819.1Two-component system, OmpR family, response regulator. (246 aa)    
Predicted Functional Partners:
SCL65995.1
PAS/PAC sensor signal transduction histidine kinase.
 
 0.988
SCL51991.1
Signal transduction histidine kinase.
  
0.986
SCL52814.1
Two-component system, OmpR family, sensor kinase.
 0.983
SCL63921.1
Signal transduction histidine kinase; Manually curated.
  
0.941
SCL67718.1
Two-component system, OmpR family, sensor histidine kinase SenX3.
 0.918
SCL47337.1
Two-component system, OmpR family, sensor histidine kinase MtrB.
 
 0.912
SCL62518.1
Two-component system, OmpR family, sensor kinase.
 
 0.880
SCL69185.1
Two-component system, OmpR family, sensor kinase.
 0.879
SCL52002.1
Signal transduction histidine kinase.
 
  0.874
SCL60490.1
Signal transduction histidine kinase.
 
 0.874
Your Current Organism:
Micromonospora chersina
NCBI taxonomy Id: 47854
Other names: ATCC 53710, DSM 44151, IFO 15963, JCM 9459, M. chersina, NBRC 15963, strain M956-1
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