Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCL48756.1 | SCL53304.1 | GA0070603_0643 | GA0070603_1573 | Alcohol dehydrogenase, propanol-preferring. | Ferredoxin-NADP reductase. | 0.621 |
SCL48756.1 | SCL54246.1 | GA0070603_0643 | GA0070603_1763 | Alcohol dehydrogenase, propanol-preferring. | S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase. | 0.861 |
SCL48756.1 | SCL55013.1 | GA0070603_0643 | GA0070603_1918 | Alcohol dehydrogenase, propanol-preferring. | Threonine dehydrogenase. | 0.580 |
SCL48756.1 | SCL63632.1 | GA0070603_0643 | GA0070603_3633 | Alcohol dehydrogenase, propanol-preferring. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.621 |
SCL48756.1 | ispD | GA0070603_0643 | GA0070603_1969 | Alcohol dehydrogenase, propanol-preferring. | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). | 0.586 |
SCL51062.1 | SCL53304.1 | GA0070603_1122 | GA0070603_1573 | Threonine dehydrogenase. | Ferredoxin-NADP reductase. | 0.621 |
SCL51062.1 | SCL54246.1 | GA0070603_1122 | GA0070603_1763 | Threonine dehydrogenase. | S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase. | 0.796 |
SCL51062.1 | SCL55013.1 | GA0070603_1122 | GA0070603_1918 | Threonine dehydrogenase. | Threonine dehydrogenase. | 0.562 |
SCL51062.1 | SCL63632.1 | GA0070603_1122 | GA0070603_3633 | Threonine dehydrogenase. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.621 |
SCL51062.1 | ispD | GA0070603_1122 | GA0070603_1969 | Threonine dehydrogenase. | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). | 0.586 |
SCL53304.1 | SCL48756.1 | GA0070603_1573 | GA0070603_0643 | Ferredoxin-NADP reductase. | Alcohol dehydrogenase, propanol-preferring. | 0.621 |
SCL53304.1 | SCL51062.1 | GA0070603_1573 | GA0070603_1122 | Ferredoxin-NADP reductase. | Threonine dehydrogenase. | 0.621 |
SCL53304.1 | SCL54246.1 | GA0070603_1573 | GA0070603_1763 | Ferredoxin-NADP reductase. | S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase. | 0.444 |
SCL53304.1 | SCL55013.1 | GA0070603_1573 | GA0070603_1918 | Ferredoxin-NADP reductase. | Threonine dehydrogenase. | 0.556 |
SCL53304.1 | SCL62254.1 | GA0070603_1573 | GA0070603_3370 | Ferredoxin-NADP reductase. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.564 |
SCL53304.1 | SCL63632.1 | GA0070603_1573 | GA0070603_3633 | Ferredoxin-NADP reductase. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.711 |
SCL53304.1 | ispD | GA0070603_1573 | GA0070603_1969 | Ferredoxin-NADP reductase. | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). | 0.710 |
SCL54246.1 | SCL48756.1 | GA0070603_1763 | GA0070603_0643 | S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase. | Alcohol dehydrogenase, propanol-preferring. | 0.861 |
SCL54246.1 | SCL51062.1 | GA0070603_1763 | GA0070603_1122 | S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase. | Threonine dehydrogenase. | 0.796 |
SCL54246.1 | SCL53304.1 | GA0070603_1763 | GA0070603_1573 | S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase. | Ferredoxin-NADP reductase. | 0.444 |
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