Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCL56947.1 | SCL56951.1 | GA0070603_2317 | GA0070603_2318 | Acetyltransferase (GNAT) family protein. | Hypothetical protein. | 0.703 |
SCL56947.1 | SCL60406.1 | GA0070603_2317 | GA0070603_3015 | Acetyltransferase (GNAT) family protein. | Hypothetical protein. | 0.557 |
SCL56947.1 | SCL62254.1 | GA0070603_2317 | GA0070603_3370 | Acetyltransferase (GNAT) family protein. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.563 |
SCL56947.1 | SCL64480.1 | GA0070603_2317 | GA0070603_3795 | Acetyltransferase (GNAT) family protein. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.503 |
SCL56947.1 | SCL70573.1 | GA0070603_2317 | GA0070603_5585 | Acetyltransferase (GNAT) family protein. | Bifunctional DNA primase/polymerase, N-terminal. | 0.514 |
SCL56947.1 | SCL71211.1 | GA0070603_2317 | GA0070603_5837 | Acetyltransferase (GNAT) family protein. | Glutamate synthase (NADH) large subunit. | 0.542 |
SCL56947.1 | argB | GA0070603_2317 | GA0070603_1661 | Acetyltransferase (GNAT) family protein. | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.589 |
SCL56947.1 | argG | GA0070603_2317 | GA0070603_1657 | Acetyltransferase (GNAT) family protein. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.681 |
SCL56947.1 | argH | GA0070603_2317 | GA0070603_1656 | Acetyltransferase (GNAT) family protein. | Argininosuccinate lyase. | 0.575 |
SCL56947.1 | argJ | GA0070603_2317 | GA0070603_1662 | Acetyltransferase (GNAT) family protein. | Glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.572 |
SCL56951.1 | SCL56947.1 | GA0070603_2318 | GA0070603_2317 | Hypothetical protein. | Acetyltransferase (GNAT) family protein. | 0.703 |
SCL56951.1 | SCL60406.1 | GA0070603_2318 | GA0070603_3015 | Hypothetical protein. | Hypothetical protein. | 0.821 |
SCL56951.1 | SCL62254.1 | GA0070603_2318 | GA0070603_3370 | Hypothetical protein. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.642 |
SCL60406.1 | SCL56947.1 | GA0070603_3015 | GA0070603_2317 | Hypothetical protein. | Acetyltransferase (GNAT) family protein. | 0.557 |
SCL60406.1 | SCL56951.1 | GA0070603_3015 | GA0070603_2318 | Hypothetical protein. | Hypothetical protein. | 0.821 |
SCL62254.1 | SCL56947.1 | GA0070603_3370 | GA0070603_2317 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | Acetyltransferase (GNAT) family protein. | 0.563 |
SCL62254.1 | SCL56951.1 | GA0070603_3370 | GA0070603_2318 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | Hypothetical protein. | 0.642 |
SCL62254.1 | SCL64480.1 | GA0070603_3370 | GA0070603_3795 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.911 |
SCL62254.1 | SCL71211.1 | GA0070603_3370 | GA0070603_5837 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | Glutamate synthase (NADH) large subunit. | 0.977 |
SCL64480.1 | SCL56947.1 | GA0070603_3795 | GA0070603_2317 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Acetyltransferase (GNAT) family protein. | 0.503 |
page 1 of 3