Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCL57700.1 | SCL57705.1 | GA0070603_2471 | GA0070603_2472 | DNA polymerase. | Hypothetical protein. | 0.625 |
SCL57700.1 | SCL57709.1 | GA0070603_2471 | GA0070603_2473 | DNA polymerase. | Transcriptional regulator, GntR family. | 0.566 |
SCL57705.1 | SCL57700.1 | GA0070603_2472 | GA0070603_2471 | Hypothetical protein. | DNA polymerase. | 0.625 |
SCL57705.1 | SCL57709.1 | GA0070603_2472 | GA0070603_2473 | Hypothetical protein. | Transcriptional regulator, GntR family. | 0.610 |
SCL57705.1 | SCL57714.1 | GA0070603_2472 | GA0070603_2474 | Hypothetical protein. | Nitroimidazol reductase NimA, pyridoxamine 5'-phosphate oxidase superfamily. | 0.442 |
SCL57705.1 | SCL57719.1 | GA0070603_2472 | GA0070603_2475 | Hypothetical protein. | Leucine efflux protein. | 0.442 |
SCL57709.1 | SCL57700.1 | GA0070603_2473 | GA0070603_2471 | Transcriptional regulator, GntR family. | DNA polymerase. | 0.566 |
SCL57709.1 | SCL57705.1 | GA0070603_2473 | GA0070603_2472 | Transcriptional regulator, GntR family. | Hypothetical protein. | 0.610 |
SCL57709.1 | SCL57714.1 | GA0070603_2473 | GA0070603_2474 | Transcriptional regulator, GntR family. | Nitroimidazol reductase NimA, pyridoxamine 5'-phosphate oxidase superfamily. | 0.675 |
SCL57709.1 | SCL57719.1 | GA0070603_2473 | GA0070603_2475 | Transcriptional regulator, GntR family. | Leucine efflux protein. | 0.637 |
SCL57714.1 | SCL57705.1 | GA0070603_2474 | GA0070603_2472 | Nitroimidazol reductase NimA, pyridoxamine 5'-phosphate oxidase superfamily. | Hypothetical protein. | 0.442 |
SCL57714.1 | SCL57709.1 | GA0070603_2474 | GA0070603_2473 | Nitroimidazol reductase NimA, pyridoxamine 5'-phosphate oxidase superfamily. | Transcriptional regulator, GntR family. | 0.675 |
SCL57714.1 | SCL57719.1 | GA0070603_2474 | GA0070603_2475 | Nitroimidazol reductase NimA, pyridoxamine 5'-phosphate oxidase superfamily. | Leucine efflux protein. | 0.836 |
SCL57719.1 | SCL57705.1 | GA0070603_2475 | GA0070603_2472 | Leucine efflux protein. | Hypothetical protein. | 0.442 |
SCL57719.1 | SCL57709.1 | GA0070603_2475 | GA0070603_2473 | Leucine efflux protein. | Transcriptional regulator, GntR family. | 0.637 |
SCL57719.1 | SCL57714.1 | GA0070603_2475 | GA0070603_2474 | Leucine efflux protein. | Nitroimidazol reductase NimA, pyridoxamine 5'-phosphate oxidase superfamily. | 0.836 |