Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCL50051.1 | SCL52363.1 | GA0070603_0897 | GA0070603_1386 | Dihydrofolate reductase. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.599 |
SCL50051.1 | SCL61939.1 | GA0070603_0897 | GA0070603_3304 | Dihydrofolate reductase. | Dihydrofolate reductase. | 0.703 |
SCL52363.1 | SCL50051.1 | GA0070603_1386 | GA0070603_0897 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Dihydrofolate reductase. | 0.599 |
SCL52363.1 | SCL61939.1 | GA0070603_1386 | GA0070603_3304 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Dihydrofolate reductase. | 0.599 |
SCL52363.1 | SCL67972.1 | GA0070603_1386 | GA0070603_4625 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Dihydrofolate reductase. | 0.599 |
SCL61939.1 | SCL50051.1 | GA0070603_3304 | GA0070603_0897 | Dihydrofolate reductase. | Dihydrofolate reductase. | 0.703 |
SCL61939.1 | SCL52363.1 | GA0070603_3304 | GA0070603_1386 | Dihydrofolate reductase. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.599 |
SCL61939.1 | SCL61942.1 | GA0070603_3304 | GA0070603_3305 | Dihydrofolate reductase. | Hypothetical protein. | 0.533 |
SCL61939.1 | SCL67972.1 | GA0070603_3304 | GA0070603_4625 | Dihydrofolate reductase. | Dihydrofolate reductase. | 0.653 |
SCL61942.1 | SCL61939.1 | GA0070603_3305 | GA0070603_3304 | Hypothetical protein. | Dihydrofolate reductase. | 0.533 |
SCL67972.1 | SCL52363.1 | GA0070603_4625 | GA0070603_1386 | Dihydrofolate reductase. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.599 |
SCL67972.1 | SCL61939.1 | GA0070603_4625 | GA0070603_3304 | Dihydrofolate reductase. | Dihydrofolate reductase. | 0.653 |