STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL64184.1Hypothetical protein. (67 aa)    
Predicted Functional Partners:
SCL64198.1
Hypothetical protein.
       0.795
SCL64190.1
TadE-like protein.
       0.783
SCL64195.1
TadE-like protein.
       0.783
SCL64204.1
LysM domain-containing protein.
       0.752
SCL64164.1
Cellulose biosynthesis protein BcsQ.
       0.691
SCL64173.1
Type II secretion system protein F (GspF).
       0.691
SCL64178.1
Flp pilus assembly protein TadB.
       0.691
SCL64159.1
SAF domain-containing protein.
       0.689
SCL64169.1
Pilus assembly protein, ATPase of CpaF family.
       0.686
SCL64154.1
Hypothetical protein.
       0.543
Your Current Organism:
Micromonospora chersina
NCBI taxonomy Id: 47854
Other names: ATCC 53710, DSM 44151, IFO 15963, JCM 9459, M. chersina, NBRC 15963, strain M956-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.