Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCL46430.1 | SCL47198.1 | GA0070603_0162 | GA0070603_0329 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | Capsular exopolysaccharide family. | 0.475 |
SCL46430.1 | SCL48910.1 | GA0070603_0162 | GA0070603_0674 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | FHA domain-containing protein. | 0.734 |
SCL46430.1 | SCL51991.1 | GA0070603_0162 | GA0070603_1306 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | Signal transduction histidine kinase. | 0.999 |
SCL46430.1 | SCL63921.1 | GA0070603_0162 | GA0070603_3688 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | Signal transduction histidine kinase; Manually curated. | 0.999 |
SCL46430.1 | SCL64941.1 | GA0070603_0162 | GA0070603_3880 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | Serine/threonine protein phosphatase PrpC. | 0.751 |
SCL46430.1 | SCL65149.1 | GA0070603_0162 | GA0070603_3916 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | FHA domain-containing protein. | 0.734 |
SCL46430.1 | SCL65204.1 | GA0070603_0162 | GA0070603_3928 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | PASTA domain-containing protein. | 0.463 |
SCL46430.1 | SCL65209.1 | GA0070603_0162 | GA0070603_3929 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | PASTA domain-containing protein. | 0.688 |
SCL46430.1 | SCL69436.1 | GA0070603_0162 | GA0070603_5125 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | FHA domain-containing protein. | 0.978 |
SCL46430.1 | ribBA | GA0070603_0162 | GA0070603_1678 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.902 |
SCL47198.1 | SCL46430.1 | GA0070603_0329 | GA0070603_0162 | Capsular exopolysaccharide family. | Anti-sigma regulatory factor (Ser/Thr protein kinase). | 0.475 |
SCL47198.1 | SCL65204.1 | GA0070603_0329 | GA0070603_3928 | Capsular exopolysaccharide family. | PASTA domain-containing protein. | 0.536 |
SCL47198.1 | SCL65209.1 | GA0070603_0329 | GA0070603_3929 | Capsular exopolysaccharide family. | PASTA domain-containing protein. | 0.856 |
SCL48910.1 | SCL46430.1 | GA0070603_0674 | GA0070603_0162 | FHA domain-containing protein. | Anti-sigma regulatory factor (Ser/Thr protein kinase). | 0.734 |
SCL48910.1 | SCL51991.1 | GA0070603_0674 | GA0070603_1306 | FHA domain-containing protein. | Signal transduction histidine kinase. | 0.774 |
SCL48910.1 | SCL63921.1 | GA0070603_0674 | GA0070603_3688 | FHA domain-containing protein. | Signal transduction histidine kinase; Manually curated. | 0.727 |
SCL48910.1 | SCL64941.1 | GA0070603_0674 | GA0070603_3880 | FHA domain-containing protein. | Serine/threonine protein phosphatase PrpC. | 0.584 |
SCL48910.1 | SCL65204.1 | GA0070603_0674 | GA0070603_3928 | FHA domain-containing protein. | PASTA domain-containing protein. | 0.439 |
SCL48910.1 | SCL65209.1 | GA0070603_0674 | GA0070603_3929 | FHA domain-containing protein. | PASTA domain-containing protein. | 0.966 |
SCL48910.1 | ribBA | GA0070603_0674 | GA0070603_1678 | FHA domain-containing protein. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.633 |
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