STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL67314.1Transcriptional regulator, DeoR family. (261 aa)    
Predicted Functional Partners:
SCL57467.1
Acyl-CoA synthetase (NDP forming); Manually curated.
    
   0.858
SCL67309.1
Fructoselysine-6-P-deglycase FrlB with duplicated sugar isomerase (SIS) domain.
 
    0.786
SCL67301.1
N-acetylglucosamine 6-phosphate deacetylase.
 
    0.731
SCL69818.1
Ribose 5-phosphate isomerase B.
  
 
 0.633
SCL67452.1
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.572
SCL67322.1
ABC-2 family transporter protein.
       0.538
SCL67318.1
ABC-2 type transport system ATP-binding protein.
       0.533
SCL55881.1
5-deoxyglucuronate isomerase.
 
  
 0.530
SCL67305.1
Glucokinase.
       0.509
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 
  
 0.495
Your Current Organism:
Micromonospora chersina
NCBI taxonomy Id: 47854
Other names: ATCC 53710, DSM 44151, IFO 15963, JCM 9459, M. chersina, NBRC 15963, strain M956-1
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