STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL44900.1Hypothetical protein. (130 aa)    
Predicted Functional Partners:
SCL44894.1
Hypothetical protein.
  
    0.780
SCL44896.1
Excreted virulence factor EspC, type VII ESX diderm.
       0.773
SCL44898.1
Uncharacterized conserved protein YukE.
       0.773
SCL45328.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
  
 0.731
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
  0.634
SCL72479.1
Endo-1,4-beta-xylanase (glycosyl hydrolase family 10).
  
 0.594
SCL69114.1
Chitinase family 18; Belongs to the glycosyl hydrolase 18 family.
  
  0.583
SCL44883.1
Intein N-terminal splicing region.
  
    0.499
SCL44023.1
Lysophospholipase L1.
   
  0.462
SCL45003.1
Lysophospholipase L1.
   
  0.462
Your Current Organism:
Micromonospora citrea
NCBI taxonomy Id: 47855
Other names: ATCC 35571, DSM 43903, IFO 14025, JCM 3256, M. citrea, Micromonospora citrea Kroppenstedt et al. 2005, NRRL B-16101
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.