STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL45520.1Two-component system, NarL family, sensor histidine kinase DesK. (372 aa)    
Predicted Functional Partners:
SCL45517.1
Two component transcriptional regulator, LuxR family.
 
  0.986
SCL60083.1
Two component transcriptional regulator, LuxR family.
 
  0.931
SCL72621.1
Two-component system, NarL family, response regulator DesR.
  
  0.898
SCL72619.1
Two component transcriptional regulator, LuxR family.
  
  0.848
SCL58360.1
Signal transduction histidine kinase.
  
  0.762
SCL45523.1
Hypothetical protein.
 
     0.741
SCL46310.1
Signal transduction histidine kinase.
  
 0.735
SCL70922.1
Signal transduction histidine kinase.
  
     0.707
SCL60998.1
PAS/PAC sensor signal transduction histidine kinase.
   
 0.627
SCL69978.1
Response regulator receiver domain-containing protein.
  
  0.585
Your Current Organism:
Micromonospora citrea
NCBI taxonomy Id: 47855
Other names: ATCC 35571, DSM 43903, IFO 14025, JCM 3256, M. citrea, Micromonospora citrea Kroppenstedt et al. 2005, NRRL B-16101
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