STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL46324.1Uncharacterized membrane protein YbhN, UPF0104 family. (314 aa)    
Predicted Functional Partners:
SCL46330.1
Hypothetical protein.
 
    0.929
SCL46314.1
5-amino-6-(5-phosphoribosylamino)uracil reductase.
 
     0.927
SCL46339.1
6-pyruvoyl-tetrahydropterin synthase.
 
     0.925
SCL46334.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.921
SCL46345.1
Threonine dehydrogenase.
 
    0.912
SCL46351.1
Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
 0.898
SCL46355.1
Hypothetical protein.
 
    0.896
ribA
GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family.
       0.790
SCL64935.1
Predicted outer membrane protein.
  
     0.463
Your Current Organism:
Micromonospora citrea
NCBI taxonomy Id: 47855
Other names: ATCC 35571, DSM 43903, IFO 14025, JCM 3256, M. citrea, Micromonospora citrea Kroppenstedt et al. 2005, NRRL B-16101
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