Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCL49112.1 | SCL49118.1 | GA0070606_1417 | GA0070606_1418 | O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain. | Peptidase family M23. | 0.655 |
SCL49112.1 | SCL49124.1 | GA0070606_1417 | GA0070606_1419 | O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain. | RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family. | 0.445 |
SCL49118.1 | SCL49112.1 | GA0070606_1418 | GA0070606_1417 | Peptidase family M23. | O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain. | 0.655 |
SCL49118.1 | SCL49124.1 | GA0070606_1418 | GA0070606_1419 | Peptidase family M23. | RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family. | 0.516 |
SCL49118.1 | SCL49131.1 | GA0070606_1418 | GA0070606_1420 | Peptidase family M23. | Uncharacterized conserved protein. | 0.407 |
SCL49118.1 | SCL51496.1 | GA0070606_1418 | GA0070606_1807 | Peptidase family M23. | Peptidase family M23. | 0.661 |
SCL49118.1 | SCL65215.1 | GA0070606_1418 | GA0070606_4102 | Peptidase family M23. | Peptidase family M23. | 0.695 |
SCL49124.1 | SCL49112.1 | GA0070606_1419 | GA0070606_1417 | RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family. | O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain. | 0.445 |
SCL49124.1 | SCL49118.1 | GA0070606_1419 | GA0070606_1418 | RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family. | Peptidase family M23. | 0.516 |
SCL49124.1 | SCL49131.1 | GA0070606_1419 | GA0070606_1420 | RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family. | Uncharacterized conserved protein. | 0.904 |
SCL49131.1 | SCL49118.1 | GA0070606_1420 | GA0070606_1418 | Uncharacterized conserved protein. | Peptidase family M23. | 0.407 |
SCL49131.1 | SCL49124.1 | GA0070606_1420 | GA0070606_1419 | Uncharacterized conserved protein. | RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family. | 0.904 |
SCL51496.1 | SCL49118.1 | GA0070606_1807 | GA0070606_1418 | Peptidase family M23. | Peptidase family M23. | 0.661 |
SCL65215.1 | SCL49118.1 | GA0070606_4102 | GA0070606_1418 | Peptidase family M23. | Peptidase family M23. | 0.695 |