Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
SCL50614.1Catechol 2,3-dioxygenase. (135 aa)    
Predicted Functional Partners:
SCL50609.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
     0.913
SCL50603.1
Transcriptional regulator, ArsR family.
       0.773
SCL66700.1
(R)-ethylmalonyl-CoA mutase.
    
 0.760
SCL71992.1
Acyl transferase domain-containing protein.
  
 0.741
SCL56229.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
     
 0.675
SCL71224.1
Acetyl/propionyl-CoA carboxylase, alpha subunit; Manually curated.
  
 
 0.652
SCL44653.1
4-hydroxymandelate oxidase.
     
  0.598
SCL71121.1
Glyoxylase, beta-lactamase superfamily II.
   
  0.575
SCL71126.1
Glyoxylase, beta-lactamase superfamily II.
   
  0.575
SCL69450.1
Glutamate synthase (NADH) large subunit.
     
  0.548
Your Current Organism:
Micromonospora citrea
NCBI taxonomy Id: 47855
Other names: ATCC 35571, DSM 43903, IFO 14025, JCM 3256, M. citrea, Micromonospora citrea Kroppenstedt et al. 2005, NRRL B-16101
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