STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL57116.1Protein of unknown function. (359 aa)    
Predicted Functional Partners:
SCL70320.1
Fibronectin type III domain-containing protein.
  
  0.796
SCL51539.1
DivIVA domain-containing protein.
  
    0.742
SCL56710.1
Hypothetical protein.
  
     0.741
SCL51030.1
Hypothetical protein.
  
     0.738
SCL68325.1
Hypothetical protein.
  
     0.737
SCL60319.1
Transmembrane protein of unknown function.
  
     0.732
SCL63919.1
Hypothetical protein.
  
     0.729
SCL72704.1
Hypothetical protein.
  
  0.727
SCL68767.1
Protein of unknown function.
  
   
 0.726
SCL66764.1
DivIVA protein.
  
     0.715
Your Current Organism:
Micromonospora citrea
NCBI taxonomy Id: 47855
Other names: ATCC 35571, DSM 43903, IFO 14025, JCM 3256, M. citrea, Micromonospora citrea Kroppenstedt et al. 2005, NRRL B-16101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.