STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL58460.1Serine/threonine-protein kinase RsbT. (139 aa)    
Predicted Functional Partners:
SCL58466.1
rsbT co-antagonist protein RsbR.
 
 
 0.994
SCL58462.1
rsbT antagonist protein RsbS.
 
   0.983
SCL58441.1
Response regulator receiver domain-containing protein.
 
 0.962
SCL58454.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
 
  
0.942
SCL58448.1
Signal transduction histidine kinase.
 
    0.936
SCL58472.1
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
 
   0.850
SCL51355.1
Signal transduction histidine kinase.
 
 
 0.696
SCL57590.1
Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
   0.664
SCL44751.1
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
  
   0.656
SCL46386.1
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
  
   0.655
Your Current Organism:
Micromonospora citrea
NCBI taxonomy Id: 47855
Other names: ATCC 35571, DSM 43903, IFO 14025, JCM 3256, M. citrea, Micromonospora citrea Kroppenstedt et al. 2005, NRRL B-16101
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