Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCL43844.1 | SCL58969.1 | GA0070606_0035 | GA0070606_3026 | TraM recognition site of TraD and TraG. | Protein of unknown function. | 0.877 |
SCL52542.1 | SCL58969.1 | GA0070606_1973 | GA0070606_3026 | Hypothetical protein. | Protein of unknown function. | 0.400 |
SCL57266.1 | SCL58969.1 | GA0070606_2741 | GA0070606_3026 | TIGR03089 family protein. | Protein of unknown function. | 0.430 |
SCL58845.1 | SCL58969.1 | GA0070606_3002 | GA0070606_3026 | TadE-like protein; Manually curated. | Protein of unknown function. | 0.433 |
SCL58969.1 | SCL43844.1 | GA0070606_3026 | GA0070606_0035 | Protein of unknown function. | TraM recognition site of TraD and TraG. | 0.877 |
SCL58969.1 | SCL52542.1 | GA0070606_3026 | GA0070606_1973 | Protein of unknown function. | Hypothetical protein. | 0.400 |
SCL58969.1 | SCL57266.1 | GA0070606_3026 | GA0070606_2741 | Protein of unknown function. | TIGR03089 family protein. | 0.430 |
SCL58969.1 | SCL58845.1 | GA0070606_3026 | GA0070606_3002 | Protein of unknown function. | TadE-like protein; Manually curated. | 0.433 |
SCL58969.1 | SCL58974.1 | GA0070606_3026 | GA0070606_3027 | Protein of unknown function. | Hypothetical protein. | 0.538 |
SCL58969.1 | SCL58981.1 | GA0070606_3026 | GA0070606_3028 | Protein of unknown function. | Amino acid/amide ABC transporter substrate-binding protein, HAAT family. | 0.458 |
SCL58969.1 | SCL67018.1 | GA0070606_3026 | GA0070606_4459 | Protein of unknown function. | Protein of unknown function. | 0.408 |
SCL58969.1 | SCL69156.1 | GA0070606_3026 | GA0070606_4993 | Protein of unknown function. | Protein of unknown function. | 0.456 |
SCL58969.1 | SCL72547.1 | GA0070606_3026 | GA0070606_6166 | Protein of unknown function. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.660 |
SCL58974.1 | SCL58969.1 | GA0070606_3027 | GA0070606_3026 | Hypothetical protein. | Protein of unknown function. | 0.538 |
SCL58974.1 | SCL58981.1 | GA0070606_3027 | GA0070606_3028 | Hypothetical protein. | Amino acid/amide ABC transporter substrate-binding protein, HAAT family. | 0.528 |
SCL58981.1 | SCL58969.1 | GA0070606_3028 | GA0070606_3026 | Amino acid/amide ABC transporter substrate-binding protein, HAAT family. | Protein of unknown function. | 0.458 |
SCL58981.1 | SCL58974.1 | GA0070606_3028 | GA0070606_3027 | Amino acid/amide ABC transporter substrate-binding protein, HAAT family. | Hypothetical protein. | 0.528 |
SCL67018.1 | SCL58969.1 | GA0070606_4459 | GA0070606_3026 | Protein of unknown function. | Protein of unknown function. | 0.408 |
SCL69156.1 | SCL58969.1 | GA0070606_4993 | GA0070606_3026 | Protein of unknown function. | Protein of unknown function. | 0.456 |
SCL72547.1 | SCL58969.1 | GA0070606_6166 | GA0070606_3026 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Protein of unknown function. | 0.660 |