STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL58969.1Protein of unknown function. (235 aa)    
Predicted Functional Partners:
SCL43844.1
TraM recognition site of TraD and TraG.
 
 
 
 0.877
SCL72547.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.660
SCL58974.1
Hypothetical protein.
       0.538
SCL58981.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
     0.458
SCL69156.1
Protein of unknown function.
  
     0.456
SCL58845.1
TadE-like protein; Manually curated.
  
     0.433
SCL57266.1
TIGR03089 family protein.
  
     0.430
SCL67018.1
Protein of unknown function.
  
     0.408
SCL52542.1
Hypothetical protein.
  
     0.400
Your Current Organism:
Micromonospora citrea
NCBI taxonomy Id: 47855
Other names: ATCC 35571, DSM 43903, IFO 14025, JCM 3256, M. citrea, Micromonospora citrea Kroppenstedt et al. 2005, NRRL B-16101
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