Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCL56976.1 | SCL60655.1 | GA0070606_2693 | GA0070606_3308 | Dienelactone hydrolase. | Predicted phosphoribosyltransferase. | 0.979 |
SCL56976.1 | SCL66470.1 | GA0070606_2693 | GA0070606_4333 | Dienelactone hydrolase. | Erythromycin esterase homolog. | 0.899 |
SCL57373.1 | SCL66470.1 | GA0070606_2761 | GA0070606_4333 | Hypothetical protein. | Erythromycin esterase homolog. | 0.628 |
SCL60655.1 | SCL56976.1 | GA0070606_3308 | GA0070606_2693 | Predicted phosphoribosyltransferase. | Dienelactone hydrolase. | 0.979 |
SCL60655.1 | SCL66470.1 | GA0070606_3308 | GA0070606_4333 | Predicted phosphoribosyltransferase. | Erythromycin esterase homolog. | 0.943 |
SCL63555.1 | SCL66470.1 | GA0070606_3815 | GA0070606_4333 | Hypothetical protein. | Erythromycin esterase homolog. | 0.590 |
SCL66465.1 | SCL66470.1 | GA0070606_4332 | GA0070606_4333 | Protein of unknown function. | Erythromycin esterase homolog. | 0.567 |
SCL66470.1 | SCL56976.1 | GA0070606_4333 | GA0070606_2693 | Erythromycin esterase homolog. | Dienelactone hydrolase. | 0.899 |
SCL66470.1 | SCL57373.1 | GA0070606_4333 | GA0070606_2761 | Erythromycin esterase homolog. | Hypothetical protein. | 0.628 |
SCL66470.1 | SCL60655.1 | GA0070606_4333 | GA0070606_3308 | Erythromycin esterase homolog. | Predicted phosphoribosyltransferase. | 0.943 |
SCL66470.1 | SCL63555.1 | GA0070606_4333 | GA0070606_3815 | Erythromycin esterase homolog. | Hypothetical protein. | 0.590 |
SCL66470.1 | SCL66465.1 | GA0070606_4333 | GA0070606_4332 | Erythromycin esterase homolog. | Protein of unknown function. | 0.567 |
SCL66470.1 | SCL68316.1 | GA0070606_4333 | GA0070606_4760 | Erythromycin esterase homolog. | 1-phosphofructokinase. | 0.462 |
SCL66470.1 | SCL71101.1 | GA0070606_4333 | GA0070606_5613 | Erythromycin esterase homolog. | Tagatose 6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. | 0.462 |
SCL68316.1 | SCL66470.1 | GA0070606_4760 | GA0070606_4333 | 1-phosphofructokinase. | Erythromycin esterase homolog. | 0.462 |
SCL71101.1 | SCL66470.1 | GA0070606_5613 | GA0070606_4333 | Tagatose 6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. | Erythromycin esterase homolog. | 0.462 |