STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL69919.1Xaa-Pro aminopeptidase. (493 aa)    
Predicted Functional Partners:
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
    
  0.671
SCL68835.1
Aminomethyltransferase.
  
 0.667
SCL44351.1
Glycine/D-amino acid oxidase.
  
 
  0.586
SCL67442.1
Glycine/D-amino acid oxidase.
  
 
  0.586
SCL67749.1
Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family.
    
 0.568
murB
UDP-N-acetylmuramate dehydrogenase; Cell wall formation.
 
  
  0.558
SCL70215.1
Phenazine biosynthesis protein phzE.
  
 
  0.557
SCL65044.1
IMP dehydrogenase.
  
 
   0.542
SCL67674.1
Membrane alanyl aminopeptidase Metallo peptidase. MEROPS family M01.
  
 
 0.540
SCL69922.1
Asparagine synthase (glutamine-hydrolysing).
  
   0.540
Your Current Organism:
Micromonospora citrea
NCBI taxonomy Id: 47855
Other names: ATCC 35571, DSM 43903, IFO 14025, JCM 3256, M. citrea, Micromonospora citrea Kroppenstedt et al. 2005, NRRL B-16101
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