STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL70315.1Transglutaminase-like superfamily protein. (792 aa)    
Predicted Functional Partners:
SCL70318.1
Uncharacterized conserved protein, DUF58 family, contains vWF domain.
 
    0.980
SCL70320.1
Fibronectin type III domain-containing protein.
 
     0.937
SCL70319.1
MoxR-like ATPase.
 
     0.918
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
 
  0.727
SCL55380.1
Hypothetical protein.
  
     0.684
SCL59073.1
Carboxypeptidase regulatory-like domain-containing protein.
  
     0.663
SCL63771.1
Hypothetical protein.
  
  
  0.663
SCL49527.1
Tetratricopeptide repeat-containing protein.
  
     0.657
SCL69208.1
Uncharacterized conserved protein, DUF58 family, contains vWF domain.
 
    0.650
SCL64653.1
Hypothetical protein.
  
     0.632
Your Current Organism:
Micromonospora citrea
NCBI taxonomy Id: 47855
Other names: ATCC 35571, DSM 43903, IFO 14025, JCM 3256, M. citrea, Micromonospora citrea Kroppenstedt et al. 2005, NRRL B-16101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.