STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL72113.1Serine/threonine-protein kinase PknG. (722 aa)    
Predicted Functional Partners:
SCL72923.1
FHA domain-containing protein.
 
 
 0.991
SCL72119.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
  
 0.984
SCL72123.1
Hypothetical protein.
 
  
 0.969
SCL46310.1
Signal transduction histidine kinase.
  
 0.966
SCL58360.1
Signal transduction histidine kinase.
  
 0.945
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
 0.927
SCL72109.1
Von Willebrand factor type A domain-containing protein.
 
    0.918
SCL59872.1
FHA domain-containing protein.
 
 
 0.832
SCL58542.1
Protein phosphatase.
 
 
 0.808
SCL48055.1
Protein phosphatase.
 
 
 0.805
Your Current Organism:
Micromonospora citrea
NCBI taxonomy Id: 47855
Other names: ATCC 35571, DSM 43903, IFO 14025, JCM 3256, M. citrea, Micromonospora citrea Kroppenstedt et al. 2005, NRRL B-16101
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