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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG34065.1Serine protease, subtilisin family; Belongs to the peptidase S8 family. (1126 aa)    
Predicted Functional Partners:
SCG36647.1
Alpha-tubulin suppressor.
   
 0.678
SCG34067.1
Maltose O-acetyltransferase.
       0.555
SCG70496.1
Hypothetical protein.
  
 
   0.534
SCG67179.1
Hypothetical protein.
  
 
   0.517
SCG71554.1
Intein C-terminal splicing region/intein N-terminal splicing region/RHS repeat-associated core domain-containing protein.
  
    0.473
SCG67098.1
RHS repeat-associated core domain-containing protein.
  
    0.468
SCG55278.1
Predicted kinase.
  
     0.462
SCG58010.1
Intein C-terminal splicing region/intein N-terminal splicing region/RHS repeat-associated core domain-containing protein.
  
    0.454
SCG45329.1
Polymorphic outer membrane protein repeat-containing protein.
  
 
  0.453
SCG71558.1
Hypothetical protein.
  
 
   0.453
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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