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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG34201.1Interferon-induced transmembrane protein. (101 aa)    
Predicted Functional Partners:
SCG35868.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.978
SCG33819.1
Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.975
SCG35856.1
Putative ABC transport system permease protein.
  
 0.952
SCG54877.1
Putative ABC transport system permease protein.
  
 0.952
SCG64433.1
Hypothetical protein.
    
 
 0.885
SCG70954.1
HAMP domain-containing protein.
     
 0.755
SCG34205.1
Hypothetical protein.
 
     0.734
SCG34577.1
Putative ABC transport system ATP-binding protein.
   
 0.704
SCG35861.1
Putative ABC transport system ATP-binding protein.
   
 0.704
SCG44732.1
Putative ABC transport system ATP-binding protein.
   
 0.704
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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