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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG34275.1TQXA domain-containing protein. (367 aa)    
Predicted Functional Partners:
SCG70954.1
HAMP domain-containing protein.
   
  0.792
SCG52904.1
GAF domain-containing protein.
   
  0.558
SCG51646.1
Trypsin-like peptidase domain-containing protein.
  
     0.506
SCG34313.1
ADP-ribose pyrophosphatase YjhB, NUDIX family; Belongs to the Nudix hydrolase family.
  
     0.498
SCG51001.1
Hypothetical protein.
  
     0.483
SCG46934.1
Protein of unknown function DUF2617.
  
     0.480
SCG34284.1
Phage shock protein C (PspC) family protein.
   
   0.464
SCG34280.1
Two component transcriptional regulator, LuxR family.
   
   0.461
SCG67908.1
Transporter associated domain-containing protein.
  
     0.433
SCG48775.1
GDSL-like Lipase/Acylhydrolase family protein.
  
     0.418
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.