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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG34418.1Signal transduction histidine kinase. (597 aa)    
Predicted Functional Partners:
SCG34423.1
Two component transcriptional regulator, LuxR family.
 
 0.974
SCG69324.1
Two component transcriptional regulator, LuxR family.
 
 0.887
SCG70622.1
Two-component system, NarL family, response regulator DesR.
 
 0.887
SCG70628.1
Two-component system, NarL family, response regulator DesR.
 
 0.887
SCG38188.1
Two component transcriptional regulator, LuxR family.
 
 0.885
SCG39327.1
Two component transcriptional regulator, LuxR family.
 
 0.885
SCG37760.1
Two component transcriptional regulator, LuxR family.
 
 0.884
SCG43160.1
Two component transcriptional regulator, LuxR family.
 
 0.884
SCG44739.1
Two component transcriptional regulator, LuxR family.
 
 0.884
SCG50732.1
Two component transcriptional regulator, LuxR family.
 
 0.884
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.