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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG34656.1Predicted regulator of Ras-like GTPase activity, Roadblock/LC7/MglB family. (135 aa)    
Predicted Functional Partners:
SCG34644.1
Signal recognition particle receptor subunit beta, a GTPase.
 
 
 0.970
SCG34660.1
Signal transduction histidine kinase.
 
   
 0.955
SCG41474.1
Hypothetical protein.
 
 
 0.934
SCG61623.1
Hypothetical protein.
 
 
 0.934
SCG44399.1
Signal recognition particle receptor subunit beta, a GTPase.
 
   0.928
SCG53570.1
Hypothetical protein.
 
   0.928
SCG59574.1
Hypothetical protein.
  
   0.925
SCG34650.1
Protein of unknown function.
 
  
 0.914
SCG41467.1
Protein of unknown function.
 
  
 0.809
SCG53577.1
Protein of unknown function.
 
  
 0.808
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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