| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SCG35654.1 | rplM | GA0070560_101470 | GA0070560_101311 | Smr domain-containing protein. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.876 |
| SCG35654.1 | rplQ | GA0070560_101470 | GA0070560_101344 | Smr domain-containing protein. | LSU ribosomal protein L17P. | 0.876 |
| SCG35654.1 | rplW | GA0070560_101470 | GA0070560_101370 | Smr domain-containing protein. | LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.878 |
| SCG35654.1 | rpmB | GA0070560_101470 | GA0070560_11199 | Smr domain-containing protein. | LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family. | 0.879 |
| SCG35654.1 | rpsD | GA0070560_101470 | GA0070560_101346 | Smr domain-containing protein. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.876 |
| SCG35654.1 | rpsG | GA0070560_101470 | GA0070560_101376 | Smr domain-containing protein. | Small subunit ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.881 |
| SCG35654.1 | rpsI | GA0070560_101470 | GA0070560_101310 | Smr domain-containing protein. | SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family. | 0.876 |
| SCG35654.1 | rpsJ | GA0070560_101470 | GA0070560_101373 | Smr domain-containing protein. | SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.878 |
| SCG35654.1 | rpsL | GA0070560_101470 | GA0070560_101377 | Smr domain-containing protein. | SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.882 |
| SCG35654.1 | rpsZ | GA0070560_101470 | GA0070560_101359 | Smr domain-containing protein. | SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | 0.879 |
| rplM | SCG35654.1 | GA0070560_101311 | GA0070560_101470 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Smr domain-containing protein. | 0.876 |
| rplM | rplQ | GA0070560_101311 | GA0070560_101344 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | LSU ribosomal protein L17P. | 0.998 |
| rplM | rplW | GA0070560_101311 | GA0070560_101370 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.999 |
| rplM | rpmB | GA0070560_101311 | GA0070560_11199 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family. | 0.995 |
| rplM | rpsD | GA0070560_101311 | GA0070560_101346 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.997 |
| rplM | rpsG | GA0070560_101311 | GA0070560_101376 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Small subunit ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.998 |
| rplM | rpsI | GA0070560_101311 | GA0070560_101310 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family. | 0.999 |
| rplM | rpsJ | GA0070560_101311 | GA0070560_101373 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.998 |
| rplM | rpsL | GA0070560_101311 | GA0070560_101377 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.998 |
| rplM | rpsZ | GA0070560_101311 | GA0070560_101359 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | 0.996 |
STRING v12.5 is now available!
