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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG35901.1Putative stress-induced transcription regulator. (192 aa)    
Predicted Functional Partners:
SCG35896.1
Glutathionylspermidine synthase.
       0.728
SCG35888.1
Hypothetical protein.
       0.722
SCG56894.1
Threonine/homoserine efflux transporter RhtA.
 
     0.638
SCG40707.1
Hypothetical protein.
  
     0.619
SCG35883.1
L-proline dehydrogenase.
       0.554
SCG68084.1
Hypothetical protein.
  
     0.435
SCG57552.1
Hypothetical protein.
  
     0.431
SCG54620.1
Hypothetical protein.
  
     0.425
SCG35876.1
Peptidase MA superfamily.
       0.412
SCG34370.1
Peptidase family M1.
  
     0.406
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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