STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG37566.1MinD-like ATPase involved in chromosome partitioning or flagellar assembly. (485 aa)    
Predicted Functional Partners:
SCG56500.1
Hypothetical protein.
  
     0.672
SCG56493.1
AAA-like domain-containing protein.
  
     0.644
SCG65324.1
Hypothetical protein.
  
     0.618
SCG48647.1
CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
     0.607
SCG70954.1
HAMP domain-containing protein.
  
 
 0.594
SCG67958.1
Hypothetical protein.
  
 
   0.583
SCG37558.1
Protein of unknown function.
 
     0.579
SCG62769.1
Protein of unknown function.
  
     0.577
SCG37573.1
Hypothetical protein.
       0.575
SCG39444.1
N-terminal domain of peptidoglycan hydrolase CwlO-containing protein.
  
     0.567
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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