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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG38694.1Feruloyl esterase. (412 aa)    
Predicted Functional Partners:
SCG62309.1
Ricin-type beta-trefoil lectin domain-like.
  
 
   0.692
SCG62302.1
Poly(3-hydroxybutyrate) depolymerase.
  
     0.610
SCG66626.1
Endo-1,4-beta-xylanase.
 
   0.608
SCG67086.1
Cellulase/cellobiase CelA1; Belongs to the glycosyl hydrolase 12 (cellulase H) family.
 
     0.596
SCG50410.1
Endo-1,4-beta-xylanase (glycosyl hydrolase family 10).
 
 
   0.594
SCG45932.1
Endo-1,4-beta-xylanase (glycosyl hydrolase family 10).
 
   0.571
SCG70120.1
Terpene synthase family, metal binding domain.
  
     0.553
SCG38702.1
Predicted membrane protein.
       0.552
SCG67732.1
Endo-1,4-beta-xylanase.
 
   0.538
SCG37423.1
Terpene synthase family, metal binding domain.
  
     0.534
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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