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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG36628.1Hypothetical protein. (75 aa)    
Predicted Functional Partners:
SCG36620.1
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.751
SCG61953.1
Protein of unknown function.
  
     0.592
SCG52817.1
Hypothetical protein.
  
     0.584
SCG36635.1
ATPase components of ABC transporters with duplicated ATPase domains.
  
    0.579
SCG69752.1
Streptomyces sporulation and cell division protein, SsgA.
  
     0.511
SCG48259.1
Protein of unknown function.
  
     0.461
SCG48004.1
Hypothetical protein.
  
     0.460
SCG66054.1
Transcriptional regulator, contains XRE-family HTH domain.
  
     0.447
SCG36614.1
ATP-binding cassette, subfamily B.
       0.436
SCG38760.1
Protein of unknown function.
  
     0.423
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.