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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG36984.1Beta-lactamase class A. (288 aa)    
Predicted Functional Partners:
SCG43544.1
Beta-lactamase class A.
  
  
  0.891
SCG36998.1
L-alanine-DL-glutamate epimerase.
 
     0.626
SCG36978.1
GTP-binding protein.
       0.542
SCG45119.1
Circularly permuted ATP-grasp type 2.
  
     0.485
SCG36969.1
Undecaprenyl-diphosphatase.
 
     0.479
SCG49939.1
Uncharacterized conserved protein, DUF2267 family.
  
     0.468
SCG60541.1
Ribosomal protein S18 acetylase RimI.
  
     0.463
SCG42924.1
Hypothetical protein.
  
     0.441
SCG64229.1
Glyoxalase-like domain-containing protein.
  
     0.409
SCG49754.1
Uncharacterized conserved protein, DUF2267 family.
  
     0.406
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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