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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG37119.1Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family. (392 aa)    
Predicted Functional Partners:
SCG37111.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
 
 0.999
SCG37126.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
SCG37105.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.
 
 0.998
SCG55306.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
 
 0.996
SCG37131.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
 
  0.994
SCG55300.1
Branched-chain amino acid transport system ATP-binding protein.
 
 0.994
SCG35540.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
 
 0.993
SCG35533.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.
 
 0.988
SCG64698.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
 
 0.988
SCG55295.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 0.987
Your Current Organism:
Micromonospora halophytica
NCBI taxonomy Id: 47864
Other names: ATCC 27596, DSM 43171, IFO 14112, JCM 3125, M. halophytica, Micromonospora halophytica subsp. halophytica, NBRC 14112, NRRL 2998
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